The detailed information of tRNA gene sequence


Sequence ID>SRA1003143
Genome IDSRR002326.239915
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 114
End posion on genome 204
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tactggccac
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGGGGGCTAATAACCC
CCCTCGGGTTCGAATCCCGATCTCTCCGCCA
Downstream region at tRNA end position 
gacagccggg
Secondary structure (Cloverleaf model)
>SRA1003143	Ser	GGA
                   c      GCCA gacagccggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     A G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       T C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGGGGGCTAATAACCCCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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