The detailed information of tRNA gene sequence


Sequence ID>W1810173080
Genome IDPJMU01000002
Search identical group
Phylum/ClassBacteroidota
SpeciesPontibacter ramchanderi LP43 [PJMU]
Start position on genome 1145711
End posion on genome 1145785
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaataacag
tRNA gene sequence 
TGCGGGATGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCACAGGTTCGAGT
CCTGTTCCCGCTACCt
Downstream region at tRNA end position 
cagaaaagcc
Secondary structure (Cloverleaf model)
>W1810173080	Met	CAT
                   g      ACCt cagaaaagcc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        G      | | | | |     G
    T       C G A G       A C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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