The detailed information of tRNA gene sequence


Sequence ID>SRA1003171
Genome IDSRR002326.276102
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 240
End posion on genome 155
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttcgctcgaa
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCCTCTAACGAGTACGC
TGGTTCGAATCCAGCCCCATCCACCA
Downstream region at tRNA end position 
ttgaaaattg
Secondary structure (Cloverleaf model)
>SRA1003171	Tyr	GTA
                   a      ACCA ttgaaaattg
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CCTCTAACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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