The detailed information of tRNA gene sequence


Sequence ID>SRA1003209
Genome IDSRR002326.307297
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 204
End posion on genome 123
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagtatgaaa
tRNA gene sequence 
GACACTTTGGCCGAGTGGTTAAGGCGTTGGCCTGCTAAGCCAATGGGTTTTCCCGCGAGA
GTTCAAATCTCTCAGGTGTCGCtc
Downstream region at tRNA end position 
ttttttactg
Secondary structure (Cloverleaf model)
>SRA1003209	Ser	GCT
                   a      GCtc ttttttactg
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGTTTTCCCGC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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