The detailed information of tRNA gene sequence


Sequence ID>SRA1003219
Genome IDSRR002326.313562
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 194
End posion on genome 119
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cttgaatcct
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGTCATCCTCCACCA
Downstream region at tRNA end position 
cttatttatt
Secondary structure (Cloverleaf model)
>SRA1003219	Ala	TGC
                   t      ACCA cttatttatt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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