The detailed information of tRNA gene sequence


Sequence ID>SRA1003220
Genome IDSRR002326.314085
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 58
End posion on genome 134
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctatctacca
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
aactctcaaa
Secondary structure (Cloverleaf model)
>SRA1003220	Asp	GTC
                   a      GCCA aactctcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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