The detailed information of tRNA gene sequence


Sequence ID>SRA1003296
Genome IDSRR002326.370493
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 126
End posion on genome 51
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttttaaaaaa
tRNA gene sequence 
GGGAGTTTAGCTCAGCTGGTTTAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGA
ACCCGTCAACTCCCACac
Downstream region at tRNA end position 
tgataatcaa
Secondary structure (Cloverleaf model)
>SRA1003296	Val	TAC
                   a      ACac tgataatcaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A          C A
                    T     C T G C C     A
    T C G A        A      | + | | |     G
  G         C T C G       G G C G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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