The detailed information of tRNA gene sequence


Sequence ID>SRA1003384
Genome IDSRR002326.427831
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 9
End posion on genome 86
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnatcttcat
tRNA gene sequence 
GGGACGTTAGCTCAGTTGGTTTAGAGCATTACTTTGACAGAGTAGGGGTCATTGGTTCGA
GTCCAATACGTCCCACCA
Downstream region at tRNA end position 
tgatttttta
Secondary structure (Cloverleaf model)
>SRA1003384	Val	GAC
                   t      ACCA tgatttttta
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A          T G
                    T     T A A C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A T T G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    T - A
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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