The detailed information of tRNA gene sequence


Sequence ID>SRA1003406
Genome IDSRR002326.440563
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 98
End posion on genome 174
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattaaaaac
tRNA gene sequence 
GGTCCTATAGCTCATTCGGTTAGAGCAACTGACTCATAATCAGTAGGTGCTTGGTTCGAT
TCCAAGTGGGACCACAA
Downstream region at tRNA end position 
taaaaaccct
Secondary structure (Cloverleaf model)
>SRA1003406	Met	CAT
                   c      ACAA taaaaaccct
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G A A C C     A
      T T A        A      | | | | |     G
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTG
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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