The detailed information of tRNA gene sequence


Sequence ID>SRA1003453
Genome IDSRR002326.477799
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 46
End posion on genome 122
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gaacgaaaaa
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCTACGTTCGGGACGTAGAGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
attcatgagc
Secondary structure (Cloverleaf model)
>SRA1003453	Pro	CGG
                   a      ACCA attcatgagc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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