The detailed information of tRNA gene sequence


Sequence ID>SRA1003493
Genome IDSRR002326.505452
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 147
End posion on genome 222
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctcttgctgt
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGCAGTTCGATC
CTGCTTATCTCCACCA
Downstream region at tRNA end position 
cagaattagc
Secondary structure (Cloverleaf model)
>SRA1003493	Ala	GGC
                   t      ACCA cagaattagc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          C T
                    T     T C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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