The detailed information of tRNA gene sequence


Sequence ID>SRA1003499
Genome IDSRR002326.509613
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 269
End posion on genome 194
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nggttttttt
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATC
CCGCTTACCTCCACCA
Downstream region at tRNA end position 
ataaattgtc
Secondary structure (Cloverleaf model)
>SRA1003499	Ala	GGC
                   t      ACCA ataaattgtc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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