The detailed information of tRNA gene sequence


Sequence ID>SRA1003510
Genome IDSRR002326.512234
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 157
End posion on genome 68
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgtcttgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCACCGCACTCGAAATGCGGCGTGCCCGTGAGGGTA
CCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
cgcactacgc
Secondary structure (Cloverleaf model)
>SRA1003510	Ser	CGA
                   c      GCCA cgcactacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTGCCCGTGAGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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