The detailed information of tRNA gene sequence


Sequence ID>SRA1003530
Genome IDSRR002326.536589
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 238
End posion on genome 155
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
ctttctcttt
tRNA gene sequence
GGGTAGATGGCCGAGTGGTTAAAGGCGACAGACTGTAAATCTGTTCACGTAAGTGTACGT
AGGTTCGAACCCTACTCTGCCCACag
Downstream region at tRNA end position
tccccgatag
Secondary structure (Cloverleaf model)
>SRA1003530	Tyr	GTA
                   t      ACag tccccgatag
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C
                     A - T          C A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T A G G     C
    G         | | |                 T T
    T       A G G C
      T A A        G     TCACGTAAGTGTAC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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