The detailed information of tRNA gene sequence


Sequence ID>SRA1003547
Genome IDSRR002327.16674
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 251
End posion on genome 177
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nntcaagtca
tRNA gene sequence 
CGGGCTGTGGCGCAGCTTGGTAGCGCACTTGACTGGGGGTCAAGGGGTCGCAGGTTCAAA
TCCTGTCAGCCCGACag
Downstream region at tRNA end position 
aaaaattact
Secondary structure (Cloverleaf model)
>SRA1003547	Pro	GGG
                   a      ACag aaaaattact
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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