The detailed information of tRNA gene sequence


Sequence ID>SRA1003549
Genome IDSRR002327.20621
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 199
End posion on genome 123
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aataatagcc
tRNA gene sequence 
GGGGGGTTAGCTCAGTTGGCTAGAGCATCTGCCTTGCACGCAGAGGGTCATCGGTTCGAC
TCCGATATCCTCCACAA
Downstream region at tRNA end position 
acaattgaag
Secondary structure (Cloverleaf model)
>SRA1003549	Ala	TGC
                   c      ACAA acaattgaag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G + T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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