The detailed information of tRNA gene sequence


Sequence ID>SRA1003583
Genome IDSRR002327.48339
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 52
End posion on genome 128
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggcgatccgt
tRNA gene sequence 
CGGGGAGTGGCGCAGCCTGGTAGCGCGTCTGCTTTGGGAGCAGAGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
acatttgtgg
Secondary structure (Cloverleaf model)
>SRA1003583	Pro	TGG
                   t      ACCA acatttgtgg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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