The detailed information of tRNA gene sequence


Sequence ID>SRA1003606
Genome IDSRR002327.65505
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 85
End posion on genome 161
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
aggaacgcgt
tRNA gene sequence
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGCTGGTTCGAA
TCCAGCCAGACCCACCA
Downstream region at tRNA end position
gggcgacaag
Secondary structure (Cloverleaf model)
>SRA1003606	Ile	GAT
                   t      ACCA gggcgacaag
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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