The detailed information of tRNA gene sequence


Sequence ID>SRA1003621
Genome IDSRR002327.71134
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 142
End posion on genome 215
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agtaaagagT
tRNA gene sequence 
GGGTAATTAACTCAGCGGTAGAGTGTCTGCCTTACAAGCAGAAGGTCACAGGTTCAAATC
CTGTATTACCCATaa
Downstream region at tRNA end position 
tatttagggc
Secondary structure (Cloverleaf model)
>SRA1003621	Val	TAC
                   T      ATaa tatttagggc
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     T - A          T A
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C A       A C A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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