The detailed information of tRNA gene sequence


Sequence ID>SRA1003659
Genome IDSRR002327.101803
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 199
End posion on genome 275
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcactacca
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCNCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
gtttaaaacg
Secondary structure (Cloverleaf model)
>SRA1003659	Asp	GTC
                   a      GCCA gtttaaaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A        | | | |     G
    T       C T T G       N C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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