The detailed information of tRNA gene sequence


Sequence ID>SRA1003707
Genome IDSRR002327.135911
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 96
End posion on genome 171
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acctcggcct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCCCTGCCCCTGCCA
Downstream region at tRNA end position 
agcccaagcg
Secondary structure (Cloverleaf model)
>SRA1003707	Trp	CCA
                   t      GCCA agcccaagcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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