The detailed information of tRNA gene sequence


Sequence ID>W1810233329
Genome IDPPDJ01000016
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax sp. DA5 [PPDJ]
Start position on genome 15280
End posion on genome 15205
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caagtcaaac
tRNA gene sequence 
GGGTGTATAGCTCCAATGGTAGAGCGGCTGATTCCAAATCAGTAGGTTTGAGGTTCGAGT
CCTCATGCGCCCGCCA
Downstream region at tRNA end position 
ctttttccaa
Secondary structure (Cloverleaf model)
>W1810233329	Trp	CCA
                   c      GCCA ctttttccaa
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     T + G
                     A - T          T G
                    T     A C T C C     A
      A A C        A      | | | | |     G
    T       C T C G       T G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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