The detailed information of tRNA gene sequence


Sequence ID>SRA1003841
Genome IDSRR002327.222204
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 85
End posion on genome 161
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcttttttgt
tRNA gene sequence 
CGGAGCGTAGCGCAGTTTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGGAGGTTCGAA
TCCTCTCGCTCCGACCA
Downstream region at tRNA end position 
ttttttaatc
Secondary structure (Cloverleaf model)
>SRA1003841	Pro	TGG
                   t      ACCA ttttttaatc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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