The detailed information of tRNA gene sequence


Sequence ID>SRA1003940
Genome IDSRR002328.50946
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 185
End posion on genome 261
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aactatctgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
attttctgaa
Secondary structure (Cloverleaf model)
>SRA1003940	Met	CAT
                   t      ACCA attttctgaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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