The detailed information of tRNA gene sequence


Sequence ID>SRA1004016
Genome IDSRR002328.97212
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 69
End posion on genome 145
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtccccttgg
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
tttcaaaaat
Secondary structure (Cloverleaf model)
>SRA1004016	Met	CAT
                   g      ACCA tttcaaaaat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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