The detailed information of tRNA gene sequence


Sequence ID>SRA1004030
Genome IDSRR002328.105035
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 125
End posion on genome 198
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttaaaaataa
tRNA gene sequence 
GCCGAAGTAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGTAGGTCGCTGGTTCGACT
CCAGTCTTCGGCTCtg
Downstream region at tRNA end position 
aaccgttgaa
Secondary structure (Cloverleaf model)
>SRA1004030	Thr	TGT
                   a      TCtg aaccgttgaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     T G A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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