The detailed information of tRNA gene sequence


Sequence ID>SRA1004042
Genome IDSRR002328.112103
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 202
End posion on genome 274
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caaataacga
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACACCACCCTTTCACGGTGATTACAGGGGTTCGAAT
CCCCTAGGGGACCgnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1004042	Glu	TTC
                   a      Cgnn nnnnnnnnnn
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TTAC
                    C   A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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