The detailed information of tRNA gene sequence


Sequence ID>SRA1004059
Genome IDSRR002328.124251
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 124
End posion on genome 48
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
nnnnnagtac
tRNA gene sequence
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCAAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position
ttatcttttg
Secondary structure (Cloverleaf model)
>SRA1004059	Asp	GTC
                   c      GCCA ttatcttttg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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