The detailed information of tRNA gene sequence


Sequence ID>SRA1004070
Genome IDSRR002328.133365
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 161
End posion on genome 89
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
accgagtaac
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAACGGTTCGATC
CCGTTCGTCTCCAtaa
Downstream region at tRNA end position 
ccgttcttgt
Secondary structure (Cloverleaf model)
>SRA1004070	Ala	TGC
                   c      Ataa ccgttcttgt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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