The detailed information of tRNA gene sequence


Sequence ID>SRA1004111
Genome IDSRR002328.153310
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 103
End posion on genome 19
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctcgcagcat
tRNA gene sequence 
GCCTCGGTGACGTAATTGGTAGCCGTGCTTGACTCAAAATCAAGTCTCGAAAGGGGTGCC
GGTTCGAGTCCGGCCCGAGGCACCA
Downstream region at tRNA end position 
gcggtgtgcc
Secondary structure (Cloverleaf model)
>SRA1004111	Leu	CAA
                   t      ACCA gcggtgtgcc
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       T G C A       G C C G G     C
    G         | | |                 T T
    G       C C G T
      T A G        G     TCTCGAAAGGGGT
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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