The detailed information of tRNA gene sequence


Sequence ID>SRA1004119
Genome IDSRR002328.157790
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ngtgcagtac
tRNA gene sequence
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCAAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position
ttatcttttg
Secondary structure (Cloverleaf model)
>SRA1004119	Asp	GTC
                   c      GCCA ttatcttttg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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