The detailed information of tRNA gene sequence


Sequence ID>SRA1004135
Genome IDSRR002328.165771
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 184
End posion on genome 257
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaactgctga
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCATCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
TCCAACCAGACCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1004135	Ile	GAT
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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