The detailed information of tRNA gene sequence


Sequence ID>SRA1004141
Genome IDSRR002328.168169
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 137
End posion on genome 228
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacaatttat
tRNA gene sequence 
GGAGAGATGCTGGAGCGGCTAAACGGCGCACGTTGGAAACGTGATGGTTGCAGCAATGCA
GCACCGGAGTTCAAATCTCCGTCTCTCCGCCA
Downstream region at tRNA end position 
gttacgtgga
Secondary structure (Cloverleaf model)
>SRA1004141	Ser	GGA
                   t      GCCA gttacgtgga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C T C     A
      C G A        G      | | | | |     A
    G       G G T C       C G G A G     C
    G         | + |                 T T
    C       A C G G
      T A A        C     TGGTTGCAGCAATGCAGCAC
                    G   A
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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