The detailed information of tRNA gene sequence


Sequence ID>SRA1004143
Genome IDSRR002328.168739
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 153
End posion on genome 227
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattttgcaa
tRNA gene sequence 
CGCGAAGTAGAGCAGCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCCTAGGTTCGATCC
CTAGCTTCGCAACTA
Downstream region at tRNA end position 
ctaaggaggt
Secondary structure (Cloverleaf model)
>SRA1004143	Met	CAT
                   a      ACTA ctaaggaggt
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C T
                    T     G A T C C     A
        G A        A      | | | | |     G
      C     C G A G       C T A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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