The detailed information of tRNA gene sequence


Sequence ID>SRA1004155
Genome IDSRR002328.175367
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 100
End posion on genome 193
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tcagtccatt
tRNA gene sequence 
GCCCGAGTGGTGGAATTGGTAGACACAGCGGACTTAAAATCCGCCGCTTTCGTGAATAGC
GGGCGTACCGGTTCGATTCCGGTCTCGGGCACCA
Downstream region at tRNA end position 
acagcacttc
Secondary structure (Cloverleaf model)
>SRA1004155	Leu	TAA
                   t      ACCA acagcacttc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T T
                    T     T G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       A C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTTTCGTGAATAGCGGGCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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