The detailed information of tRNA gene sequence


Sequence ID>SRA1004159
Genome IDSRR002328.176924
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 38
End posion on genome 114
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcgactaat
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
atatataaac
Secondary structure (Cloverleaf model)
>SRA1004159	Asp	GTC
                   t      GCCA atatataaac
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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