The detailed information of tRNA gene sequence


Sequence ID>SRA1004167
Genome IDSRR002328.179995
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 34
End posion on genome 108
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agaacttaaa
tRNA gene sequence 
GGGGGATTAGCTCATTCGGCTAGAGCGCTTCGCTGGCAGTGAAGAGGTGATCGGTTCGAA
TCCGATATTCTCCACat
Downstream region at tRNA end position 
agtaaaagcc
Secondary structure (Cloverleaf model)
>SRA1004167	Ala	GGC
                   a      ACat agtaaaagcc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T A G C C     A
      T T A        A      | | | | |     G
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTG
                    C - G
                    T - A
                    T - A
                    C - G
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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