The detailed information of tRNA gene sequence


Sequence ID>SRA1004172
Genome IDSRR002328.181759
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 152
End posion on genome 238
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgaagatgtg
tRNA gene sequence 
GCCCATGTGGCGGAATTGGTAGACGCAGCAGACTCAAAATCTGCCATTCGCAAGGGTGTG
AAGGTTCGATTCCTTTCGTGGGCACAA
Downstream region at tRNA end position 
caccagnnnn
Secondary structure (Cloverleaf model)
>SRA1004172	Leu	CAA
                   g      ACAA caccagnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     G - C          T T
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CATTCGCAAGGGTGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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