The detailed information of tRNA gene sequence


Sequence ID>SRA1004189
Genome IDSRR002328.190446
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 109
End posion on genome 33
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtgacatac
tRNA gene sequence 
CGCGCGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCAAA
TCTTGCCCGCGCAACCA
Downstream region at tRNA end position 
acatcttgcc
Secondary structure (Cloverleaf model)
>SRA1004189	Met	CAT
                   c      ACCA acatcttgcc
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | + | | |     A
    C       C G A G       G T A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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