The detailed information of tRNA gene sequence


Sequence ID>SRA1004212
Genome IDSRR002328.201872
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 178
End posion on genome 253
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atcttccaaa
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCATCGGTTCGATC
CCGTTTACCTCCACCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1004212	Ala	GGC
                   a      ACCA annnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          C T
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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