The detailed information of tRNA gene sequence


Sequence ID>SRA1004235
Genome IDSRR002328.215968
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 175
End posion on genome 85
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagcattgtc
tRNA gene sequence 
GGAGACGTGGCTGAGTGGCTGAAAGCGGCAGTTTGCTAAATTGTTGAGGATCAAAAGTCT
TCCACAGGTTCGAATCCTGTCGTCTCCGCCA
Downstream region at tRNA end position 
taattttgag
Secondary structure (Cloverleaf model)
>SRA1004235	Ser	GCT
                   c      GCCA taattttgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TGAGGATCAAAAGTCTTCC
                    G + T
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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