The detailed information of tRNA gene sequence


Sequence ID>SRA1004240
Genome IDSRR002328.217425
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 217
End posion on genome 141
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaggtggaa
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTAGGTTCAAG
TCCTACACGCCCTACCA
Downstream region at tRNA end position 
tgctggatat
Secondary structure (Cloverleaf model)
>SRA1004240	Met	CAT
                   a      ACCA tgctggatat
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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