The detailed information of tRNA gene sequence


Sequence ID>SRA1004242
Genome IDSRR002328.219056
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 180
End posion on genome 107
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
gcgccggtca
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCTTTTGCTTCCCAAGCAAGTGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
caaaaaacat
Secondary structure (Cloverleaf model)
>SRA1004242	Gly	CCC
                   a      TCCA caaaaaacat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     TGAC
                    T + G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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