The detailed information of tRNA gene sequence


Sequence ID>SRA1004250
Genome IDSRR002328.222646
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 120
End posion on genome 198
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tagtttctat
tRNA gene sequence 
CCGTTGTTCGGCTAGTCTGGTTTATGTCACTCCGTTTGGGGCGGAGATTTCGTAGGTTCA
AATCCTACACAACGGACCA
Downstream region at tRNA end position 
tagttttcat
Secondary structure (Cloverleaf model)
>SRA1004250	Pro	TGG
                   t      ACCA tagttttcat
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T A
                    T     C A T C C     A
    C T G A        C      | | | | |     A
  T         T C G G       G T A G G     C
  G           | + |                 T T
  G         T G T C
    T T T A        A     ATTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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