The detailed information of tRNA gene sequence


Sequence ID>SRA1004254
Genome IDSRR002328.225174
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 12
End posion on genome 88
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctcgcgacac
tRNA gene sequence 
GCCGCCTTAGCTCAGTTGGTTAGAGCGCTAGATTGTGGATCTAGAGGTCCTCGGTTCGAG
ACCGAGAGGTGGTACCA
Downstream region at tRNA end position 
tcgcccgccc
Secondary structure (Cloverleaf model)
>SRA1004254	His	GTG
                   c      ACCA tcgcccgccc
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     T - A          A G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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