The detailed information of tRNA gene sequence


Sequence ID>SRA1004255
Genome IDSRR002328.226211
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 30
End posion on genome 106
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggcctgcttg
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTAGCGCGCGTCGTTCGGGACGACGAGGCCGTAGGTTCGAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
ccagatgaga
Secondary structure (Cloverleaf model)
>SRA1004255	Pro	CGG
                   g      ACCA ccagatgaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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