The detailed information of tRNA gene sequence


Sequence ID>SRA1004270
Genome IDSRR002328.235589
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 238
End posion on genome 153
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctcgacatcg
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGCAGACGCACCGGATTCAGGTTCCGGCGGGGTAACTCCTGTA
AGGGGTTCAAGTCCCTTCCTTCGCACtc
Downstream region at tRNA end position 
aatatttcgg
Secondary structure (Cloverleaf model)
>SRA1004270	Leu	CAG
                   g      ACtc aatatttcgg
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T A A        G      | + | | |     A
    T       G G C G       A G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGGGTAACTCCTGTA
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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