The detailed information of tRNA gene sequence


Sequence ID>SRA1004278
Genome IDSRR002328.244579
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 156
End posion on genome 231
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cccgaaagag
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTAGAGCGTCTCGTTTACACCGAGAATGTCGGCGGTTCGAGC
CCGTCATCGCCCACCA
Downstream region at tRNA end position 
tttcttccgt
Secondary structure (Cloverleaf model)
>SRA1004278	Val	TAC
                   g      ACCA tttcttccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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