The detailed information of tRNA gene sequence


Sequence ID>SRA1004290
Genome IDSRR002328.251917
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 137
End posion on genome 213
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
cgaccggctc
tRNA gene sequence
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGGTGGTTCGAG
ACCACCCAGACCCACCA
Downstream region at tRNA end position
ttcctccaaa
Secondary structure (Cloverleaf model)
>SRA1004290	Ile	GAT
                   c      ACCA ttcctccaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          A G
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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