The detailed information of tRNA gene sequence


Sequence ID>SRA1004304
Genome IDSRR002328.258734
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 188
End posion on genome 264
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttaataatac
tRNA gene sequence
CGCGCGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCAAA
TCTTGCCCGCGCAACCA
Downstream region at tRNA end position
acatccggct
Secondary structure (Cloverleaf model)
>SRA1004304	Met	CAT
                   c      ACCA acatccggct
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | + | | |     A
    C       C G A G       G T A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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